stjude-rust-labs/sprocket — A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).

Description and use

Sprocket is an open‑source bioinformatics workflow engine that leverages the Workflow Description Language (WDL) to orchestrate complex analysis pipelines. It provides a user‑friendly front‑end for defining, executing, and monitoring tasks, making it easier for researchers to build reproducible, scalable workflows without deep DevOps expertise.

Problem

stjude-rust-labs/sprocket helps turn isolated prompts and tools into repeatable agent workflows.

Outcome

Early or unclear: treat as research material until maintenance, releases, docs, and issue activity are verified.

Workflow

• coordinate multi-agent workflows
• add tool-use pipelines
• standardize agent memory

Evidence

A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).

Source